WCSE 2020 Summer
ISBN: 978-981-14-4787-7 DOI: 10.18178/wcse.2020.06.054

Rule-Based Modeling and Simulation of Gene Expression Process

Tianqi Zhao, Cuntong Luo, Yi Yang, Liwei Feng, Xinhua Lu

Abstract— A process of gene expression which is designed and modeled by machine language, and by using to process complex data. At the molecular biological level, classifying and sorting the related substances involved in the transcription and translation processes, and using a rule-based modeling method to simulate the gene expression process. By entering the initial data of the designed gene into the program, the computer can give the result of the gene expression process. The experimental data shows that this gene expression result is correct. In this paper, we summarize the rules of the transcription and translation of the gene expression process and the basic part of the central dogma, and then formalize it, and then establish a model to realize the biological information processing in uncomplicated situations, and then realize the gene expression process on the computer.

Index Terms—gene expression simulation, rule-based modeling, computer modeling and simulation

Tianqi Zhao, Cuntong Luo, Yi Yang, Liwei Feng, Xinhua Lu
College of Computer Science and Technology, Jilin University, CHINA
Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, CHINA

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Cite:Tianqi Zhao, Cuntong Luo, Yi Yang, Liwei Feng, Xinhua Lu" Rule-Based Modeling and Simulation of Gene Expression Process " Proceedings of 2020 the 10th International Workshop on Computer Science and Engineering (WCSE 2020), pp.359-365, Shanghai, China, 19-21 June, 2020.